sql integration for create and insert captor metadata and trials ok

Code-C/CMakeLists.txt

@@ -1,9 +1,10 @@
+
 cmake_minimum_required(VERSION 2.8)
 project(Traitement-signal-plantes C)
 
 include(CTest)
 enable_testing()
-set(CMAKE_C_FLAGS "-lsqlite3 -std=c99 -g -Wall") #what are the flag for ?
+set(CMAKE_C_FLAGS "-std=c99 -g -Wall") #what are the flag for ?
 
 file(MAKE_DIRECTORY RawDataFiles) #why do we make this folder each time ?
 file(MAKE_DIRECTORY Executable)
@@ -13,7 +14,7 @@ set (CMAKE_RUNTIME_OUTPUT_DIRECTORY Executable) #Set Executable directory as def
 add_executable(exect fileGestion.c getArray.c average.c growthRate.c power.c queue.c simulateFlux.c database.c main.c)
 # add_executable(exect main.c simulateFlux.c queue.c power.c growthRate.c average.c getArray.c fileGestion.c)
 
-find_package(SQLite3)
+find_package(SQLite3 REQUIRED)
 target_link_libraries(exect ${SQLite3_LIBRARIES} m)
 
 
@@ -24,6 +25,7 @@ set(CTEST_MEMORYCHECK_TYPE "AddressSanitizer")
 set(CTEST_MEMORYCHECK_SANITIZER_OPTIONS "verbosity=1:symbolize=1:abort_on_error=1:detect_leaks=1")
 
 add_executable(ctest fileGestion.c getArray.c average.c growthRate.c queue.c simulateFlux.c database.c ctest.c)
+target_link_libraries(ctest ${SQLite3_LIBRARIES} m)
 target_link_libraries(ctest ${CMAKE_THREAD_LIBS_INIT} m)
 
 add_test(test_queueCreateEmpty ./ctest queueCreateEmpty)

Code-C/database.c

@@ -240,7 +240,7 @@ int initiaizeNewTrial(char *position, double frequency, bool *captorOneHot)
     {
         if (captorOneHot[i])
         {
-            insertCaptorMetadataElement(i, trialId);
+            insertCaptorMetadataElement(i + 1, trialId);
             createCaptorDataTable(trialId, i + 1);
         }
     }

Code-C/main.c

@@ -148,14 +148,6 @@ int main(int argc, char **argv)
     }
     printf("%d", nCol);
 
-    for (int i = 0; i < 8; i++)
-    {
-        if (selectionCaptors[i])
-        {
-            nCol++;
-        }
-    }
-
     rawDataWriteFlag = true;
 
     period = 1 / freqEch;
@@ -167,19 +159,19 @@ int main(int argc, char **argv)
     createDb();                                           // Created the Db if not exist
     initiaizeNewTrial("test", freqEch, selectionCaptors); // Initialize Trials data and tables
 
-    pthread_t rawData;
+    // pthread_t rawData;
-    if (pthread_create(&rawData, NULL, threadSimulateFlux, "threadSimulflux") != 0)
+    // if (pthread_create(&rawData, NULL, threadSimulateFlux, "threadSimulflux") != 0)
-    {
+    // {
-        perror("threadSimulflux() error");
+    //     perror("threadSimulflux() error");
-        exit(1);
+    //     exit(1);
-    }
+    // }
 
-    pthread_t calculAverage;
+    // pthread_t calculAverage;
-    if (pthread_create(&calculAverage, NULL, threadCalculAverage, "threadCalculAverage"))
+    // if (pthread_create(&calculAverage, NULL, threadCalculAverage, "threadCalculAverage"))
-    {
+    // {
-        perror("threadCalculAverage() error");
+    //     perror("threadCalculAverage() error");
-        exit(1);
+    //     exit(1);
-    }
+    // }
 
     // pthread_t calculGrowthRate;
     // if (pthread_create(&calculGrowthRate, NULL, threadCalculGrowthRate, "threadCalculGrowthRate"))
@@ -188,7 +180,7 @@ int main(int argc, char **argv)
     //     exit(1);
     // }
 
-    pthread_exit(NULL);
+    // pthread_exit(NULL);
 
     sqlite3_shutdown();
 }